Will Do.
The Latest Build can be downloaded from here: (Its the latest VS Build output)
maintrax.ravien.net/CBR_Manager/CBR_Manager.rar
Please if you start using it, either post bugs/issues/requests in here or the git hub page. Thumbnails is what I'm working on atm.
The Folder Organizer is by far the most useful tool ATM. Show the file list, and CTRL+Click on a file in the file list
will set the filter to the first word of that file, allowing you to find all copies of that comic scattered around your libary(If you
are like me and have 20+ 'Unsorted' Folders.
From the Libary list (Right Datagrid view) CTRL drag will move the files, CTRL+SHIFT+Drag Will move all the files into a new folder (You get
prompted for the folder name). That shit is handy.!

(Even if i may say so myself.)
From what i can tell comic rack has no problems re-updating the new file locations. And scraped NTFS Second Stream info seems to be retained.
EDIT: IMPORTANT! PLEASE BE AWARE that the latest build is to be considered 'Experimental'. Any deleted files will go in the recycle bin if you (or I have) stuffed up. Double check the paths in the confirmation dialogs. I will release 'stable'/'safe' builds when i get up to that point. YE BE WARNED!